268324 60KD_IMP
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268324 chr_2 60KD_IMP 1677032 1678724 + 60KD_IMP

Synonyms

NCBI ID Ensembl Genomes exon ID
7446695 Thaps268324.1, Thaps268324.3, Thaps268324.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0010

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0163
 0.38

Most Highly Correlated Transcripts

261499

MttA_Hcf106 superfamily
0.923

261608

PLN02585
0.9136

28326

lytB_ispH
0.9051

268592

VDE superfamily
0.9033

3974

(UroD2) URO-D
0.9019

263658

GUN4
0.8987

268908

Trans_IPPS_HH
0.8938

26991

GRX_GRXh_1_2_like
0.8932

36669

TPT
0.8928

268192

Zip superfamily
0.8877

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
60KD_IMP 60Kd inner membrane protein; 60Kd inner membrane protein. cl00489 173.129 1.30E-51 90 - 310 specific 251083
60KD_IMP superfamily 60Kd inner membrane protein; 60Kd inner membrane protein. - 173.129 1.30E-51 90 - 310 superfamily 260457

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_46411 PHATRDRAFT_46411 160817 257962 417071 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Protein export map03060

GO Terms

GO:0016021 GO:0051205 -

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

GO:0051205

protein insertion into membrane

Details: 
The process that results in the incorporation of a protein into a biological membrane.
GO Category: 
BP

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