268615 COG0579
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268615 chr_4 COG0579 303786 306084 + COG0579

Synonyms

NCBI ID Ensembl Genomes exon ID
7446759 Thaps268615.3, Thaps268615.1, Thaps268615.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0059

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0133
 0.40

Most Highly Correlated Transcripts

bd211

(bd211) Maf_Ham1 superfamily
0.9173

bd1645

(bd1645) tpt
0.9148

bd1403

(bd1403) NA
0.9115

bd1306

(bd1306) NA
0.9102

bd1380

(bd1380) ycf39
0.9073

bd1652

(bd1652) ABC_ATPase superfamily
0.9054

bd1757

(bd1757) NA
0.8996

bd950

(bd950) NA
0.8952

bd2073

(bd2073) psbB
0.893

bd208

(bd208) DUF3529
0.8916

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PRK11728 superfamily hydroxyglutarate oxidase; Provisional - 177.321 1.27E-49 73 - 325 superfamily 267509
COG0579 Predicted dehydrogenase [General function prediction only] - 313.824 2.48E-100 74 - 498 multi-dom 223652

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_38067 PHATRDRAFT_38067 Not available Not available 238059 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006118 GO:0016491 GO:0004368 GO:0009331 -

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0004368

glycerol-3-phosphate dehydrogenase activity

Details: 
Catalysis of the reaction: sn-glycerol 3-phosphate + a quinone = glycerone phosphate + a quinol.
GO Category: 
MF

GO:0009331

glycerol-3-phosphate dehydrogenase complex

Details: 
An enzyme complex that catalyzes the dehydrogenation of sn-glycerol 3-phosphate to form glycerone phosphate.
GO Category: 
CC

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