268929 PLN02885
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268929 chr_5 PLN02885 1604752 1606661 - PLN02885

Synonyms

NCBI ID Ensembl Genomes exon ID
7448168 Thaps268929.1, Thaps268929.4, Thaps268929.2, Thaps268929.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0362

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0109
 0.50

Most Highly Correlated Transcripts

22520

RecN
0.8876

264420

PseudoU_synth_EcTruA
0.8681

21893

CysPc
0.8654

2987

hypothetical protein
0.854

23692

hypothetical protein
0.8505

9391

hypothetical protein
0.8452

262637

P4Hc
0.845

1569

Peptidase_M8 superfamily
0.8397

27220

hypothetical protein
0.8369

22859

hypothetical protein
0.8362

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NAPRTase_A Nicotinate phosphoribosyltransferase (NAPRTase), subgroup A. Nicotinate phosphoribosyltransferase... cl17275 438.16 4.41E-151 1 - 372 specific 238804
PRTase_typeII superfamily Phosphoribosyltransferase (PRTase) type II; This family contains two enzymes that play an important... - 438.16 4.41E-151 1 - 372 superfamily 266604
PLN02885 nicotinate phosphoribosyltransferase - 938.696 0 1 - 520 multi-dom 178473

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_29887 PHATRDRAFT_29887 181497 256893 Not available Not available AT4G36940.1 351223

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0004516 GO:0019363 -

GO:0004516

nicotinate phosphoribosyltransferase activity

Details: 
Catalysis of the reaction: diphosphate + nicotinate D-ribonucleotide = 5-phospho-alpha-D-ribose 1-diphosphate + H(+) + nicotinate.
GO Category: 
MF

GO:0019363

pyridine nucleotide biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base.
GO Category: 
BP

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