269446 FGGY_CarbK-RPE_like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
269446 chr_9 FGGY_CarbK-RPE_like 852366 855058 + FGGY_CarbK-RPE_like

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0459

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0017
 0.42

Most Highly Correlated Transcripts

12836

EEP superfamily
0.857

263610

COG3899
0.8544

268234

hypothetical protein
0.8524

263599

COG3899
0.8491

10753

hypothetical protein
0.8413

24063

COG3899
0.8357

263997

(APA1) Adaptin_N
0.82

269586

hypothetical protein
0.8148

11453

SRPBCC superfamily
0.8111

23788

hypothetical protein
0.8053

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
FGGY_CarbK-RPE_like Carbohydrate kinase and ribulose-phosphate 3-epimerase fusion proteins-like; belongs to the FGGY... cl17037 753.414 0 30 - 531 specific 198360
NBD_sugar-kinase_HSP70_actin superfamily Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily; This superfamily includes... - 753.414 0 30 - 531 superfamily 266502
AraB Ribulose kinase [Energy production and conversion] - 336.604 1.64E-107 28 - 528 multi-dom 223995

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_12881 PHATRDRAFT_12881 185794 294700 60950 Cre12.g543902.t1.1 AT4G30310.2 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005975 GO:0008741 -

GO:0005975

carbohydrate metabolic process

Details: 
The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO Category: 
BP

GO:0008741

ribulokinase activity

Details: 
Catalysis of the reaction: ATP + L(or D)-ribulose = ADP + L(or D)-ribulose 5-phosphate.
GO Category: 
MF

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