270137 EFhThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
270137	chr_24	EFh	31427	32506	-	EFh

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448921	Thaps270137.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0182

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0030	0.47	0.00000015 1000

Most Highly Correlated Transcripts

4192 hypothetical protein 0.8774	30701 PRK05279 0.8745	4916 hypothetical protein 0.8663	11490 hypothetical protein 0.8543	35136 NA 0.8524	2571 hypothetical protein 0.8522
4359 hypothetical protein 0.8498	9242 hypothetical protein 0.8497	10673 hypothetical protein 0.8494	261607 IF4E 0.847

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
EFh superfamily		EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal...	-	67.9581	3.47E-15	62 - 124	superfamily	238008
EFh superfamily		EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal...	-	67.9581	3.47E-15	62 - 124	superfamily	238008

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0005509 -

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