270145 (LASPO) NadB
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
270145 chr_24 (LASPO) NadB 153993 156349 + NadB

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0221

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0272
 0.25

Most Highly Correlated Transcripts

35164

acolac_lg
0.8922

268688

hypothetical protein
0.8889

bd524

(bd524) NA
0.8835

bd621

(bd621) NA
0.8778

bd1876

(bd1876) NatB_MDM20 superfamily
0.8741

bd1807

(bd1807) RRS1 superfamily
0.87

27873

PLN02274
0.8651

34729

NGP_1
0.8624

38143

WD40 superfamily
0.8526

10273

zf-met2
0.8512

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PRK06175 superfamily L-aspartate oxidase; Provisional - 249.602 4.78E-76 38 - 454 superfamily 180442
NadB Aspartate oxidase [Coenzyme metabolism] - 390.848 3.59E-129 29 - 569 multi-dom 223108

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_30807 PHATRDRAFT_30807 237199 318564 Not available Not available Not available 327550

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006118 GO:0016491 GO:0008734 GO:0015922 -

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0008734

L-aspartate oxidase activity

Details: 
Catalysis of the reaction: L-aspartate + O2 = iminosuccinate + hydrogen peroxide.
GO Category: 
MF

GO:0015922

aspartate oxidase activity

Details: 
Catalysis of the reaction: aspartate + O2 = iminosuccinate + hydrogen peroxide.
GO Category: 
MF

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