27618 Ribosomal_L10
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
27618 chr_3 Ribosomal_L10 1883929 1884653 + Ribosomal_L10

Synonyms

NCBI ID Ensembl Genomes exon ID
7452054 Thaps27618.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0039

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0235
 0.25

Most Highly Correlated Transcripts

31451

rplO
0.963

21235

RpsA
0.9538

37166

(RK17) rplQ
0.9176

20452

(RK28) Ribosomal_L28
0.9065

40034

thrS
0.906

23462

hypothetical protein
0.9053

40028

PLN02286
0.9045

26191

asnC
0.8983

269765

RluA
0.8975

6610

hypothetical protein
0.897

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ribosomal_L10 Ribosomal protein L10 family, L10 subfamily; composed of bacterial 50S ribosomal protein and... cl00376 134.939 1.25E-39 41 - 198 specific 240223
Ribosomal_L10_P0 superfamily Ribosomal protein L10 family; composed of the large subunit ribosomal protein called L10 in... - 134.939 1.25E-39 41 - 198 superfamily 260390

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_14715 PHATRDRAFT_14715 162264 301550 443529 Cre06.g272850.t1.2 AT5G13510.1 Not available

KEGG

KEGG description KEGG Pathway
Ribosome map03010

GO Terms

GO:0005622 GO:0042254 -

GO:0005622

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

GO:0042254

ribosome biogenesis

Details: 
A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis.
GO Category: 
BP

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