29144 PRK06349
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
29144 chr_8 PRK06349 551062 552559 + PRK06349

Synonyms

NCBI ID Ensembl Genomes exon ID
7450163 Thaps29144.1, Thaps29144.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0219

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0079
 0.38

Most Highly Correlated Transcripts

34021

Methyltrn_RNA_3
0.9326

261852

AdoMet_MTases superfamily
0.9193

264345

SpoU
0.9185

21959

hypothetical protein
0.9134

22334

hypothetical protein
0.9067

34176

AdoMet_MTases superfamily
0.9037

261270

0.9036

21933

RNA_pol_I_A49 superfamily
0.9017

24038

hypothetical protein
0.9016

22599

hypothetical protein
0.8986

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Homoserine_dh superfamily Homoserine dehydrogenase; Homoserine dehydrogenase. - 228.487 1.15E-72 141 - 324 superfamily 250099
Homoserine_dh superfamily Homoserine dehydrogenase; Homoserine dehydrogenase. - 228.487 1.15E-72 141 - 324 superfamily 250099
PRK06349 homoserine dehydrogenase; Provisional - 402.529 5.39E-137 13 - 429 multi-dom 235783

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48694 PHATRDRAFT_48694 Not available Not available Not available Not available Not available 284984

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004412 GO:0008652 -

GO:0004412

homoserine dehydrogenase activity

Details: 
Catalysis of the reaction: L-homoserine + NADP+ = L-aspartate-4-semialdehyde + NADPH + H+.
GO Category: 
MF

GO:0008652

cellular amino acid biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents.
GO Category: 
BP

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