2984 Dynein_heavy superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
2984 chr_2 Dynein_heavy superfamily 2409478 2423872 - Dynein_heavy superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0322

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0076
 0.36

Most Highly Correlated Transcripts

5829

hypothetical protein
0.9268

22947

zf-UBR
0.9153

5497

hypothetical protein
0.9083

21122

Nipped-B_C
0.9072

23494

hypothetical protein
0.9021

24852

hypothetical protein
0.9021

23279

Tho2
0.8978

25397

MviM
0.8954

20630

Piwi-like superfamily
0.8915

5788

TFIIS_M
0.8902

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Dynein_heavy superfamily Dynein heavy chain and region D6 of dynein motor; This family represents the C-terminal region of... - 638.202 0 3835 - 4569 superfamily 251681
DHC_N1 superfamily Dynein heavy chain, N-terminal region 1; Dynein heavy chains interact with other heavy chains to... - 405.511 5.28E-123 188 - 754 superfamily 254766
DHC_N1 superfamily Dynein heavy chain, N-terminal region 1; Dynein heavy chains interact with other heavy chains to... - 405.511 5.28E-123 188 - 754 superfamily 254766
DHC_N2 superfamily Dynein heavy chain, N-terminal region 2; Dyneins are described as motor proteins of eukaryotic... - 388.864 1.55E-119 1256 - 1663 superfamily 254773
DHC_N2 superfamily Dynein heavy chain, N-terminal region 2; Dyneins are described as motor proteins of eukaryotic... - 388.864 1.55E-119 1256 - 1663 superfamily 254773
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 286.9 1.37E-86 1813 - 2042 superfamily 267297
AAA_8 superfamily P-loop containing dynein motor region D4; The 380 kDa motor unit of dynein belongs to the AAA class... - 218.663 1.49E-62 2819 - 3081 superfamily 193256
AAA_9 superfamily ATP-binding dynein motor region D5; The 380 kDa motor unit of dynein belongs to the AAA class of... - 196.36 2.54E-55 3470 - 3703 superfamily 193257
AAA_7 superfamily P-loop containing dynein motor region D3; the 380 kDa motor unit of dynein belongs to the AAA class... - 163.183 2.45E-43 2444 - 2692 superfamily 193251
MT superfamily Microtubule-binding stalk of dynein motor; the 380 kDa motor unit of dynein belongs to the AAA... - 157.506 1.06E-40 3095 - 3449 superfamily 193253

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004197 GO:0006508 GO:0003777 GO:0007018 GO:0030286 GO:0008567 -

GO:0004197

cysteine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
GO Category: 
MF

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0003777

microtubule motor activity

Details: 
Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP).
GO Category: 
MF

GO:0007018

microtubule-based movement

Details: 
A microtubule-based process that is mediated by motor proteins and results in the movement of organelles, other microtubules, or other particles along microtubules.
GO Category: 
BP

GO:0030286

dynein complex

Details: 
Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity.
GO Category: 
CC

GO:0008567

NA

Details: 
NA
GO Category: 
NA

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