29955 (RS5) PTZ00091
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
29955 chr_14 (RS5) PTZ00091 269174 269851 - PTZ00091
NCBI ID Ensembl Genomes exon ID
7451203 Thaps29955.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0047
Normalized Mean Residue
Thaps_bicluster_0227
0.33
(RS4) PLN00036
0.9453
(rpl23) PTZ00054
0.945
(RL32) Ribosomal_L32_L32e
0.9373
(RL14) Ribosomal_L14e
0.9272
Ribosomal_L7Ae
0.9231
(RS23) Ribosomal_S23
0.9165
(RL11A) PTZ00156
0.9153
PTZ00129
0.9148
(RL26) KOW_RPL26
0.905
PT_UbiA_Cox10
0.8967
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PTZ00091 40S ribosomal protein S5; Provisional cl00313 349.066 7.85E-123 28 - 218 specific 185439
Ribosomal_S7 superfamily Ribosomal protein S7p/S5e; This family contains ribosomal protein S7 from prokaryotes and S5 from... - 349.066 7.85E-123 28 - 218 superfamily 260345
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_29097 PHATRDRAFT_29097 272939 302387 446237 Cre06.g290950.t1.2 AT2G37270.2 355955
KEGG description KEGG Pathway
Ribosome map03010
GO:0003735 GO:0005622 GO:0005840 GO:0006412 GO:0015935 -

structural constituent of ribosome

Details: 
The action of a molecule that contributes to the structural integrity of the ribosome.
GO Category: 
MF

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

ribosome

Details: 
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO Category: 
CC

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP

small ribosomal subunit

Details: 
The smaller of the two subunits of a ribosome.
GO Category: 
CC
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