30036 (RS27) PLN00209
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
30036 chr_14 (RS27) PLN00209 619122 619467 + PLN00209
NCBI ID Ensembl Genomes exon ID
7451256 Thaps30036.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0046
Normalized Mean Residue
Thaps_bicluster_0205
0.26
(RS11) Ribosomal_S17 superfamily
0.9326
(RL37A) PTZ00073
0.9279
(RL35) Ribosomal_L29_HIP
0.9255
(RS25) Ribosomal_S25
0.923
Ribosomal_L31e
0.9218
(RL28) Ribosomal_L28e
0.9194
PTZ00106
0.9194
(RL38) Ribosomal_L38e
0.9171
(RS24) PTZ00071
0.9169
Ubiquitin
0.9123
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PLN00209 ribosomal protein S27; Provisional cl00897 164.596 4.59E-54 1 - 82 specific 165774
Ribosomal_S27e superfamily Ribosomal protein S27; Ribosomal protein S27. - 164.596 4.59E-54 1 - 82 superfamily 260687
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_bd477 PHATRDRAFT_bd477 272579 67382 425447 Cre12.g529400.t1.2 AT3G61110.1 285418
KEGG description KEGG Pathway
Ribosome map03010
GO:0003735 GO:0005622 GO:0005840 GO:0006412 -

structural constituent of ribosome

Details: 
The action of a molecule that contributes to the structural integrity of the ribosome.
GO Category: 
MF

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

ribosome

Details: 
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO Category: 
CC

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP
Log in to post comments