42457 (RS25) Ribosomal_S25
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
42457 chr_14 (RS25) Ribosomal_S25 791319 792079 + Ribosomal_S25

Synonyms

NCBI ID Ensembl Genomes exon ID
7441816 Thaps42457.2, Thaps42457.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0046

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0205
 0.26

Most Highly Correlated Transcripts

26893

(RS18) PTZ00134
0.9331

269086

(RS24) PTZ00071
0.9314

32675

(RS15B) PTZ00096
0.9285

25949

(RL11A) PTZ00156
0.9235

30036

(RS27) PLN00209
0.923

39282

(RL15) PTZ00026
0.9213

34368

(RL37A) PTZ00073
0.9187

42114

(RL35) Ribosomal_L29_HIP
0.9171

27101

Ribosomal_L31e
0.916

39499

(RL14) Ribosomal_L14e
0.9152

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ribosomal_S25 S25 ribosomal protein; S25 ribosomal protein. cl02050 99.7704 4.50E-28 1 - 106 specific 251856
Ribosomal_S25 superfamily S25 ribosomal protein; S25 ribosomal protein. - 99.7704 4.50E-28 1 - 106 superfamily 261161

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
4296 PHATR_21073 PHATR_21073 237751 301791 60245 Cre08.g382500.t1.2 AT2G16360.1 285813

KEGG

KEGG description KEGG Pathway
Ribosome map03010

GO Terms

Not available -

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