3018 AAT_I
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
3018 chr_2 AAT_I 2535330 2537570 + AAT_I

Synonyms

NCBI ID Ensembl Genomes exon ID
7452946 Thaps3018.1, Thaps3018.3, Thaps3018.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0221

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0226
 0.29

Most Highly Correlated Transcripts

10273

zf-met2
0.8537

36650

hypothetical protein
0.841

268970

PGDH_like_3
0.8355

263424

PLN02551
0.808

bd621

(bd621) NA
0.8061

26492

PRK05385
0.8033

263630

(MTS) tRNA_bind_EMAP-II_like
0.8011

1374

RRM
0.7988

31415

hypothetical protein
0.7948

21397

Nop52 superfamily
0.7909

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent... cl18945 97.8382 9.93E-24 111 - 265 specific 99742
AAT_I superfamily Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent... - 97.8382 9.93E-24 111 - 265 superfamily 267298

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_42458 PHATRDRAFT_42458 195514 242377 435273 Not available Not available 545686

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0009058 GO:0004648 -

GO:0009058

biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO Category: 
BP

GO:0004648

O-phospho-L-serine:2-oxoglutarate aminotransferase activity

Details: 
Catalysis of the reaction: O-phospho-L-serine + 2-oxoglutarate = 3-phosphonooxypyruvate + L-glutamate.
GO Category: 
MF

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