3092 IRK superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
3092 chr_3 IRK superfamily 105802 108642 - IRK superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7442441 Thaps3092.4, Thaps3092.1, Thaps3092.5, Thaps3092.2, Thaps3092.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0389

Most Highly Correlated Transcripts

bd1747

(bd1747) NA
0.7796

263298

Chitin_synth_C
0.7524

270222

0.7395

263301

Chitin_synth_C
0.7379

6422

hypothetical protein
0.7092

bd1944

(bd1944) Glyco_hydro_79n superfamily
0.6977

31762

(CAT2) Carn_acyltransf superfamily
0.694

24764

hypothetical protein
0.6927

5857

hypothetical protein
0.6735

bd174

(bd174) Tim17 superfamily
0.6725

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
IRK superfamily Inward rectifier potassium channel; Inward rectifier potassium channel. - 102.778 5.80E-24 235 - 542 superfamily 250289

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_49496 PHATRDRAFT_49496 269055 233903 106991 Cre06.g311650.t1.1 Not available 245871

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005267 GO:0006813 GO:0016020 GO:0005242 -

GO:0005267

potassium channel activity

Details: 
Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism.
GO Category: 
MF

GO:0006813

potassium ion transport

Details: 
The directed movement of potassium ions (K+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

GO:0005242

inward rectifier potassium channel activity

Details: 
Catalysis of the transmembrane transfer of a potassium ion by an inwardly-rectifying voltage-gated channel. An inwardly rectifying current-voltage relation is one where at any given driving force the inward flow of K+ ions exceeds the outward flow for the opposite driving force. The inward-rectification is due to a voltage-dependent block of the channel pore by a specific ligand or ligands, and as a result the macroscopic conductance depends on the difference between membrane voltage and the K+ equilibrium potential rather than on membrane voltage itself.
GO Category: 
MF

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