31034 cyclophilin superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
31034	chr_1	cyclophilin superfamily	1462893	1463777	+	cyclophilin superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442923	Thaps31034.3, Thaps31034.2, Thaps31034.1, Thaps31034.4

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0112

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0242	0.38	6400 20000

Most Highly Correlated Transcripts

bd1835 (bd1835) NA 0.9148	9345 hypothetical protein 0.9109	41655 Chloroa_b-bind 0.9097	bd692 (bd692) NA 0.9078	268881 Mod_r superfamily 0.9077	bd1813 (bd1813) NA 0.9061
3715 hypothetical protein 0.9017	22726 hypothetical protein 0.8927	269624 TIM_phosphate_binding superfamily 0.8883	24373 hypothetical protein 0.8882

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
cyclophilin superfamily		cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic...	-	235.892	1.70E-79	16 - 160	superfamily	260252

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_43430	PHATRDRAFT_43430	214996	288047	78487	Cre12.g499400.t1.2	AT2G36130.1	355199

KEGG

KEGG description	KEGG Pathway
Spliceosome	map03040

GO Terms

GO:0006457 GO:0003755 GO:0004600 GO:0030051 GO:0042027 -

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