31222 Ribosomal_S15p_S13e
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
31222 chr_1 Ribosomal_S15p_S13e 1367010 1367834 + Ribosomal_S15p_S13e
NCBI ID Ensembl Genomes exon ID
7451459 Thaps31222.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0050
FBPase
0.9171
(KE4) Zip
0.9053
(GGTA1) PLN02789
0.9027
Aldolase_II superfamily
0.9023
rplC
0.9017
2-Hacid_dh_1
0.895
Ribosomal_L7_L12
0.8949
RNase_PH superfamily
0.894
TCP1_alpha
0.8913
FBPase
0.8911
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ribosomal_S15p_S13e Ribosomal protein S15 (prokaryotic)_S13 (eukaryotic) binds the central domain of 16S rRNA and is... cl00349 85.2474 2.81E-21 192 - 271 specific 238213
S15_NS1_EPRS_RNA-bind superfamily S15/NS1/EPRS_RNA-binding domain. This short domain consists of a helix-turn-helix structure, which... - 85.2474 2.81E-21 192 - 271 superfamily 260373
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_9411 PHATRDRAFT_9411 223542 309092 Not available Not available AT1G80620.1 511360
KEGG description KEGG Pathway
Not available Not available
GO:0003735 GO:0005622 GO:0005840 GO:0006412 -

structural constituent of ribosome

Details: 
The action of a molecule that contributes to the structural integrity of the ribosome.
GO Category: 
MF

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

ribosome

Details: 
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO Category: 
CC

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP
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