31777 (OCT1) CoA_trans superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
31777 chr_2 (OCT1) CoA_trans superfamily 2259873 2261767 - CoA_trans superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7452905 Thaps31777.2, Thaps31777.1, Thaps31777.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0405

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0126
 0.34

Most Highly Correlated Transcripts

6047

TLD superfamily
0.9211

268867

Peptidase_S28 superfamily
0.9075

13448

Sec1
0.8977

3310

hypothetical protein
0.8921

261400

NA
0.8895

4909

hypothetical protein
0.8866

22524

hypothetical protein
0.886

1588

hypothetical protein
0.8851

21434

AAA_26
0.8848

21956

GcvR
0.8821

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CoA_trans superfamily Coenzyme A transferase; Coenzyme A transferase. - 248.7 2.44E-78 87 - 324 superfamily 247801
AtoD Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit [Lipid metabolism] cl17247 248.7 2.44E-78 87 - 324 specific 224702
CoA_trans superfamily Coenzyme A transferase; Coenzyme A transferase. - 248.7 2.44E-78 87 - 324 superfamily 247801
COG4670 Acyl CoA:acetate/3-ketoacid CoA transferase [Lipid metabolism] - 152.073 3.94E-40 93 - 568 multi-dom 227016

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_23365 PHATRDRAFT_23365 Not available 207333 71084 Not available Not available 350484

KEGG

KEGG description KEGG Pathway
Butanoate metabolism map00650

GO Terms

GO:0008152 GO:0008410 GO:0008260 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0008410

CoA-transferase activity

Details: 
Catalysis of the transfer of a coenzyme A (CoA) group from one compound (donor) to another (acceptor).
GO Category: 
MF

GO:0008260

3-oxoacid CoA-transferase activity

Details: 
Catalysis of the reaction: succinyl-CoA + a 3-oxo acid = succinate + a 3-oxo-acyl-CoA.
GO Category: 
MF

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