32561 (Tp_CCHH4) DnaJThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
32561	chr_3	(Tp_CCHH4) DnaJ	1808761	1809705	-	DnaJ

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445334	Thaps32561.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0318

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0020	0.47	9500 1

Most Highly Correlated Transcripts

bd96 (bd96) eIF-3_zeta 0.8579	262617 (Tp_Myb2R7) MYB DNA binding protein/ transcription factor-like protein 0.8466	20461 DnaJ 0.8463	19360 HELICc 0.8449	5779 hypothetical protein 0.8437	5694 hypothetical protein 0.8372
992 hypothetical protein 0.8372	42543 2OG-FeII_Oxy_2 0.8318	34710 SNF2_N 0.8314	11371 hypothetical protein 0.8298

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DnaJ		DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play...	cl02542	73.7337	3.57E-17	7 - 66	specific	99751
DnaJ superfamily		DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play...	-	73.7337	3.57E-17	7 - 66	superfamily	261333

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_36016	PHATRDRAFT_36016	213350	182868	62466	Cre05.g240650.t1.2	AT1G74250.1	474795

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0006457 GO:0031072 GO:0051082 -

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