32758 Ntn_hydrolase superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
32758 chr_3 Ntn_hydrolase superfamily 1265108 1266124 + Ntn_hydrolase superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7451711 Thaps32758.3, Thaps32758.2, Thaps32758.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0328

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0217
 0.33

Most Highly Correlated Transcripts

41655

Chloroa_b-bind
0.8567

269624

TIM_phosphate_binding superfamily
0.8563

bd923

(bd923) NA
0.856

268435

hypothetical protein
0.8527

16114

PLN02350
0.8525

13448

Sec1
0.8511

37118

FeThRed_B
0.848

19158

GRX_PICOT_like
0.8418

bd1806

(bd1806) AAT_I superfamily
0.8339

5185

RPN7 superfamily
0.8267

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ntn_hydrolase superfamily The Ntn hydrolases (N-terminal nucleophile) are a diverse superfamily of of enzymes that are... - 165.476 3.20E-50 29 - 226 superfamily 260443
PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover,... - 103.532 2.13E-26 28 - 223 multi-dom 223711

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
33252 Not available 162196 202208 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Proteasome map03050

GO Terms

GO:0004175 GO:0005839 GO:0006511 GO:0004298 GO:0004299 -

GO:0004175

endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain.
GO Category: 
MF

GO:0005839

proteasome core complex

Details: 
A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex.
GO Category: 
CC

GO:0006511

ubiquitin-dependent protein catabolic process

Details: 
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
GO Category: 
BP

GO:0004298

threonine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile.
GO Category: 
MF

GO:0004299

NA

Details: 
NA
GO Category: 
NA

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