33780 UBQ superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
33780 chr_4 UBQ superfamily 1203317 1203533 - UBQ superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7446094 Thaps33780.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0212

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0120
 0.39

Most Highly Correlated Transcripts

26991

GRX_GRXh_1_2_like
0.8812

3119

hypothetical protein
0.8811

8486

hypothetical protein
0.8756

37934

GRX_PICOT_like
0.8737

11479

hypothetical protein
0.8731

plastid_psb28

0.8719

5957

hypothetical protein
0.8676

31064

PTZ00044
0.8657

3730

hypothetical protein
0.8567

7249

(ARF5) Ras_like_GTPase superfamily
0.8559

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
UBQ superfamily Ubiquitin-like proteins; Ubiquitin homologs; Includes ubiquitin and ubiquitin-like proteins.... - 95.7623 2.88E-27 1 - 69 superfamily 260222

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_27817 PHATRDRAFT_27817 166432 302542 248024 Cre16.g675637.t1.1 AT5G55160.1 355014

KEGG

KEGG description KEGG Pathway
RNA transport map03013

GO Terms

GO:0006464 -

GO:0006464

cellular protein modification process

Details: 
The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) occurring at the level of an individual cell. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
GO Category: 
BP

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