35094 Aldolase_II superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
35094 chr_6 Aldolase_II superfamily 1026926 1027987 + Aldolase_II superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7445962 Thaps35094.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0421

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0249
 0.31

Most Highly Correlated Transcripts

bd410

(bd410) HNHc
0.9562

bd1941

(bd1941) NA
0.9483

bd415

(bd415) arom_aa_hydroxylase superfamily
0.9197

bd1841

(bd1841) CAP10 superfamily
0.9182

22671

UbiH
0.8707

bd1842

(bd1842) NA
0.8664

bd1808

(bd1808) NA
0.8638

20816

PLPDE_IV superfamily
0.8485

24999

hypothetical protein
0.839

bd1793

(bd1793) NA
0.8343

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Aldolase_II superfamily Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing... - 166.947 4.35E-49 125 - 346 superfamily 260267
2-Hacid_dh_C superfamily D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; This domain is inserted into the... - 130.285 4.33E-36 2 - 99 superfamily 267485
SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] - 118.955 1.23E-30 3 - 102 multi-dom 223189

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_15217 PHATRDRAFT_15217 265485 247319 44955 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006564 GO:0016616 -

GO:0006564

L-serine biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of L-serine, the L-enantiomer of serine, i.e. (2S)-2-amino-3-hydroxypropanoic acid.
GO Category: 
BP

GO:0016616

oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

Details: 
Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP.
GO Category: 
MF

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