35197 CBS_pair_CAP-ED_DUF294_PBI_assoc
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
35197 chr_6 CBS_pair_CAP-ED_DUF294_PBI_assoc 916669 921546 - CBS_pair_CAP-ED_DUF294_PBI_assoc

Synonyms

NCBI ID Ensembl Genomes exon ID
7442342 Thaps35197.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0089

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0164
 0.39

Most Highly Correlated Transcripts

bd439

(bd439) POLBc_alpha
0.9481

262611

RabGAP-TBC
0.9169

bd718

(bd718) PRK10387
0.9033

bd529

(bd529) SNF2_N
0.896

12846

SNF2_N
0.8925

bd1893

(bd1893) NA
0.8891

bd1983

(bd1983) RecA-like_NTPases superfamily
0.8873

bd624

(bd624) Glyco_transf_34 superfamily
0.8866

bd843

(bd843) NA
0.8845

264043

(MYB15) MYB DNA binding protein/ transcription factor-like protein
0.8826

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CBS_pair_CAP-ED_DUF294_PBI_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains... cl15354 132.741 2.35E-35 451 - 559 specific 239960
CBS_pair superfamily The CBS domain, named after human CBS, is a small domain originally identified in cystathionine... - 117.333 5.25E-30 286 - 396 superfamily 265675
CBS_pair_CAP-ED_DUF294_PBI_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains... cl15354 132.741 2.35E-35 451 - 559 specific 239960
CBS_pair superfamily The CBS domain, named after human CBS, is a small domain originally identified in cystathionine... - 117.333 5.25E-30 286 - 396 superfamily 265675
CBS_pair superfamily The CBS domain, named after human CBS, is a small domain originally identified in cystathionine... - 117.333 5.25E-30 286 - 396 superfamily 265675
CBS_pair superfamily The CBS domain, named after human CBS, is a small domain originally identified in cystathionine... - 117.333 5.25E-30 286 - 396 superfamily 265675
CBS_pair superfamily The CBS domain, named after human CBS, is a small domain originally identified in cystathionine... - 117.333 5.25E-30 286 - 396 superfamily 265675
CBS_pair superfamily The CBS domain, named after human CBS, is a small domain originally identified in cystathionine... - 117.333 5.25E-30 286 - 396 superfamily 265675
CBS_pair superfamily The CBS domain, named after human CBS, is a small domain originally identified in cystathionine... - 117.333 5.25E-30 286 - 396 superfamily 265675
CBS_pair superfamily The CBS domain, named after human CBS, is a small domain originally identified in cystathionine... - 117.333 5.25E-30 286 - 396 superfamily 265675

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_13833 PHATRDRAFT_13833 148527 325787 Not available Not available AT5G50530.1 362634

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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