36275 PLN03239Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
36275	chr_9	PLN03239	603554	606604	-	PLN03239

Synonyms

NCBI ID	Ensembl Genomes exon ID
7453041	Thaps36275.3, Thaps36275.2, Thaps36275.4, Thaps36275.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0252

Most Highly Correlated Transcripts

12836 EEP superfamily 0.9113	40929 SrmB 0.9104	21089 hypothetical protein 0.9072	bd392 (bd392) DEXDc 0.9022	37963 NOT2_3_5 0.9008	31136 Pkinase_Tyr 0.897
2154 hypothetical protein 0.8952	11498 hypothetical protein 0.8899	24334 EXS superfamily 0.8876	262287 hypothetical protein 0.8844

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
MOZ_SAS superfamily			-	343.374		420 - 722	superfamily	268119
PLN03239			-	764.198		382 - 723	multi-dom	178777

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_3062	PHATRDRAFT_3062	172955	236155	Not available	Cre03.g143907.t1.1	AT5G09740.1	501103

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0004402 -

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