3661 MMCE
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
3661 chr_3 MMCE 1482235 1482969 + MMCE

Synonyms

NCBI ID Ensembl Genomes exon ID
7451295 Thaps3661.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0137

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0261
 0.35

Most Highly Correlated Transcripts

37934

GRX_PICOT_like
0.9321

26991

GRX_GRXh_1_2_like
0.9276

7469

hypothetical protein
0.9246

33024

cysteine_hydrolases superfamily
0.9238

261184

ACD_sHsps-like
0.9222

264157

CBS_pair superfamily
0.9213

9793

NADB_Rossmann superfamily
0.919

26769

ERG4_ERG24 superfamily
0.9118

24480

ECM4
0.9094

23418

hypothetical protein
0.9071

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MMCE Methylmalonyl-CoA epimerase (MMCE); MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1)... cl14632 119.935 8.69E-34 99 - 234 specific 211350
Glo_EDI_BRP_like superfamily This domain superfamily is found in a variety of structurally related metalloproteins, including... - 119.935 8.69E-34 99 - 234 superfamily 265436

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_46728 PHATR_46728 271197 240279 368338 Not available Not available 312758

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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