37232 45_DOPA_Dioxygenase
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
37232 chr_13 45_DOPA_Dioxygenase 452233 452998 - 45_DOPA_Dioxygenase

Synonyms

NCBI ID Ensembl Genomes exon ID
7445759 Thaps37232.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0247

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0036
 0.41

Most Highly Correlated Transcripts

bd1155

(bd1155) GCS superfamily
0.8646

4108

hypothetical protein
0.8549

24044

hypothetical protein
0.8187

25810

hypothetical protein
0.7853

11296

(Tp_fungal_TRF3) regulator [Rayko]
0.7781

bd1810

(bd1810) FAD_binding_4
0.7696

41650

betA
0.763

6894

COG1741
0.7524

7070

hypothetical protein
0.7367

7683

DUF3395 superfamily
0.7216

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
45_DOPA_Dioxygenase The Class III extradiol dioxygenase, 4,5-DOPA Dioxygenase, catalyzes the incorporation of both... cl00599 246.285 4.96E-81 27 - 246 specific 153375
Extradiol_Dioxygenase_3B_like superfamily Subunit B of Class III Extradiol ring-cleavage dioxygenases; Dioxygenases catalyze the... - 246.285 4.96E-81 27 - 246 superfamily 260521

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48032 PHATRDRAFT_48032 Not available Not available Not available Cre09.g408600.t1.2 AT4G15093.1 478244

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006118 GO:0006725 GO:0008198 GO:0016491 -

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0006725

cellular aromatic compound metabolic process

Details: 
The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells.
GO Category: 
BP

GO:0008198

ferrous iron binding

Details: 
Interacting selectively and non-covalently with ferrous iron, Fe(II).
GO Category: 
MF

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

Add comment

Log in to post comments