6894 COG1741
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
6894 chr_7 COG1741 760149 761458 - COG1741

Synonyms

NCBI ID Ensembl Genomes exon ID
7449208 Thaps6894.1, Thaps6894.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0313

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0093
 0.41

Most Highly Correlated Transcripts

33580

ABCC_MRP_domain2
0.8657

plastid_psb28

0.8528

bd1155

(bd1155) GCS superfamily
0.851

4712

Enkurin
0.8501

21067

FMN_red
0.8202

13064

GCS superfamily
0.8032

25159

hypothetical protein
0.7649

36650

hypothetical protein
0.7616

37232

45_DOPA_Dioxygenase
0.7524

29212

(GSHS) PLN02977
0.7306

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Pirin superfamily Pirin; This family consists of Pirin proteins from both eukaryotes and prokaryotes. The function of... - 127.389 1.27E-35 108 - 219 superfamily 251469
Pirin superfamily Pirin; This family consists of Pirin proteins from both eukaryotes and prokaryotes. The function of... - 127.389 1.27E-35 108 - 219 superfamily 251469
Pirin_C superfamily Pirin C-terminal cupin domain; This region is found the C-terminal half of the Pirin protein. - 87.6258 2.80E-21 288 - 396 superfamily 253351
COG1741 Pirin-related protein [General function prediction only] - 226.803 3.66E-71 90 - 396 multi-dom 224655

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_42930 PHATRDRAFT_42930 171107 178446 457350 Cre16.g674964.t1.1 AT2G43120.1 558324

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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