37725 Coq4 superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
37725	chr_15	Coq4 superfamily	682656	683810	+	Coq4 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450282	Thaps37725.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0013

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0067	0.47	12 0.35

Most Highly Correlated Transcripts

28125 PLN00203 0.9291	268592 VDE superfamily 0.8633	28326 lytB_ispH 0.8552	268908 Trans_IPPS_HH 0.8509	4465 hypothetical protein 0.8496	263658 GUN4 0.8492
12089 DUF1995 superfamily 0.8487	9247 hypothetical protein 0.8464	36669 TPT 0.8412	3186 hypothetical protein 0.8375

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Coq4 superfamily		Coenzyme Q (ubiquinone) biosynthesis protein Coq4; Coq4p was shown to peripherally associate with...	-	259.469		148 - 382	superfamily	261171

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_38985	PHATRDRAFT_38985	224960	212874	66758	Cre03.g154850.t1.1	AT2G03690.1	559076

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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