3868 NADB_Rossmann superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
3868 chr_3 NADB_Rossmann superfamily 1998959 2000257 + NADB_Rossmann superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7445372 Thaps3868.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0294

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0021
 0.47

Most Highly Correlated Transcripts

7368

FAD_binding_7 superfamily
0.8425

36007

Aldolase_II superfamily
0.8339

bd1258

(bd1258) fer2
0.8336

9943

hypothetical protein
0.8311

7322

PTZ00327
0.8276

24834

hypothetical protein
0.8224

bd1809

(bd1809) ZnMc_pappalysin_like
0.8169

6780

hypothetical protein
0.8151

25473

SpoU_methylase
0.8082

bd897

(bd897) NA
0.8027

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 152.764 9.16E-43 106 - 385 superfamily 263925
FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [... - 79.8617 3.51E-17 105 - 253 multi-dom 223959

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_15297 PHATRDRAFT_15297 144249 302310 195845 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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