38775 GT1_like_2
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
38775 chr_23 GT1_like_2 260057 261734 + GT1_like_2

Synonyms

NCBI ID Ensembl Genomes exon ID
7448886 Thaps38775.2, Thaps38775.1, Thaps38775.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0019

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0128
 0.43

Most Highly Correlated Transcripts

8912

hypothetical protein
0.7673

37288

PLN02487
0.7588

270378

hypothetical protein
0.7526

11086

hypothetical protein
0.7481

24558

hypothetical protein
0.7471

7304

hypothetical protein
0.7469

2036

hypothetical protein
0.746

4440

hypothetical protein
0.7452

10233

COG1233
0.7442

264901

(Ppx1) PLN02576
0.7431

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases... cl10013 308.384 2.52E-100 74 - 434 specific 99985
Glycosyltransferase_GTB_type superfamily Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to... - 308.384 2.52E-100 74 - 434 superfamily 263942
RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] - 173.596 7.56E-49 61 - 432 multi-dom 223515

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_50356 PHATRDRAFT_50356 207999 252457 470615 Cre01.g038550.t1.1 AT5G01220.1 Not available

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0009058 GO:0000009 GO:0000026 GO:0000030 GO:0000033 GO:0003980 GO:0004376 GO:0004576 GO:0004583 GO:0008375 GO:0008376 GO:0008378 GO:0008417 GO:0008921 GO:0016253 GO:0016758 GO:0016759 GO:0018715 GO:0018716 GO:0018717 GO:0018718 GO:0019112 GO:0019187 GO:0042281 GO:0042283 GO:0046527 GO:0046920 GO:0046921 -

GO:0009058

biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO Category: 
BP

GO:0000009

alpha-1,6-mannosyltransferase activity

Details: 
Catalysis of the transfer of a mannose residue to an oligosaccharide, forming an alpha-(1->6) linkage.
GO Category: 
MF

GO:0000026

alpha-1,2-mannosyltransferase activity

Details: 
Catalysis of the transfer of a mannose residue to an oligosaccharide, forming an alpha-(1->2) linkage.
GO Category: 
MF

GO:0000030

mannosyltransferase activity

Details: 
Catalysis of the transfer of a mannosyl group to an acceptor molecule, typically another carbohydrate or a lipid.
GO Category: 
MF

GO:0000033

alpha-1,3-mannosyltransferase activity

Details: 
Catalysis of the transfer of a mannose residue to an oligosaccharide, forming an alpha-(1->3) linkage.
GO Category: 
MF

GO:0003980

UDP-glucose:glycoprotein glucosyltransferase activity

Details: 
Catalysis of the addition of UDP-glucose on to asparagine-linked (N-linked) oligosaccharides of the form Man7-9GlcNAc2 on incorrectly folded glycoproteins.
GO Category: 
MF

GO:0004376

glycolipid mannosyltransferase activity

Details: 
Catalysis of the transfer of an alpha-D-mannosyl residue from GDP-mannose into lipid-linked oligosaccharide, forming an alpha-D-mannosyl-D-mannose linkage.
GO Category: 
MF

GO:0004576

oligosaccharyl transferase activity

Details: 
Catalysis of the transfer of a oligosaccharyl group to an acceptor molecule, typically another carbohydrate or a lipid.
GO Category: 
MF

GO:0004583

dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase activity

Details: 
Catalysis of the transfer of an alpha-D-glucosyl residue from dolichyl-phosphate D-glucose into a membrane lipid-linked oligosaccharide.
GO Category: 
MF

GO:0008375

acetylglucosaminyltransferase activity

Details: 
Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to a sugar.
GO Category: 
MF

GO:0008376

acetylgalactosaminyltransferase activity

Details: 
Catalysis of the transfer of an N-acetylgalactosaminyl residue from UDP-N-acetyl-galactosamine to an oligosaccharide.
GO Category: 
MF

GO:0008378

galactosyltransferase activity

Details: 
Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid.
GO Category: 
MF

GO:0008417

fucosyltransferase activity

Details: 
Catalysis of the transfer of a fucosyl group to an acceptor molecule, typically another carbohydrate or a lipid.
GO Category: 
MF

GO:0008921

lipopolysaccharide-1,6-galactosyltransferase activity

Details: 
Catalysis of the reaction: UDP-galactose + lipopolysaccharide = UDP + 1,6 alpha-D-galactosyl-lipopolysaccharide.
GO Category: 
MF

GO:0016253

NA

Details: 
NA
GO Category: 
NA

GO:0016758

transferase activity, transferring hexosyl groups

Details: 
Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor).
GO Category: 
MF

GO:0016759

cellulose synthase activity

Details: 
Catalysis of the reaction: nucleoside-disphosphate-glucose + ((1,4)-beta-D-glucosyl)(n) = nucleoside-disphosphate + ((1,4)-beta-D-glucosyl)(n+1).
GO Category: 
MF

GO:0018715

9-phenanthrol UDP-glucuronosyltransferase activity

Details: 
Catalysis of the reaction: 9-phenanthrol + UDP-glucuronate = 9-phenanthryl-beta-D-glucuronide + UDP.
GO Category: 
MF

GO:0018716

1-phenanthrol glycosyltransferase activity

Details: 
Catalysis of the reaction: 1-phenanthrol + glucose = 1-phenanthryl-beta-D-glucopyranoside + H2O.
GO Category: 
MF

GO:0018717

9-phenanthrol glycosyltransferase activity

Details: 
Catalysis of the reaction: 9-phenanthrol + glucose = 9-phenanthryl-beta-D-glucopyranoside + H2O.
GO Category: 
MF

GO:0018718

1,2-dihydroxy-phenanthrene glycosyltransferase activity

Details: 
Catalysis of the reaction: 1,2-dihydroxyphenanthrene + UDP-glucose = 2-hydroxy-1-phenanthryl-beta-D-glucopyranoside + UDP.
GO Category: 
MF

GO:0019112

phenanthrol glycosyltransferase activity

Details: 
Catalysis of the reaction: phenanthrol + glucose = phenanthryl-beta-D-glucopyranoside + H2O.
GO Category: 
MF

GO:0019187

beta-1,4-mannosyltransferase activity

Details: 
Catalysis of the transfer of a mannose residue to an oligosaccharide, forming a beta-(1->4) linkage.
GO Category: 
MF

GO:0042281

dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity

Details: 
Catalysis of the addition of the first glucose residue to the lipid-linked oligosaccharide precursor for N-linked glycosylation; the transfer of glucose from dolichyl phosphate glucose (Dol-P-Glc) on to the lipid-linked oligosaccharide Man(9)GlcNAc(2)-PP-Dol.
GO Category: 
MF

GO:0042283

dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase activity

Details: 
Catalysis of the addition of the second glucose residue to the lipid-linked oligosaccharide precursor for N-linked glycosylation; the transfer of glucose from dolichyl phosphate glucose (Dol-P-Glc) on to the lipid-linked oligosaccharide Glc(1)Man(9)GlcNAc(2)-PP-Dol.
GO Category: 
MF

GO:0046527

glucosyltransferase activity

Details: 
Catalysis of the transfer of a glucosyl group to an acceptor molecule, typically another carbohydrate or a lipid.
GO Category: 
MF

GO:0046920

alpha-(1->3)-fucosyltransferase activity

Details: 
Catalysis of the transfer of an L-fucosyl group from GDP-beta-L-fucose to an acceptor molecule to form an alpha-(1->6) linkage.
GO Category: 
MF

GO:0046921

alpha-(1->6)-fucosyltransferase activity

Details: 
Catalysis of the transfer of an L-fucosyl group from GDP-beta-L-fucose to an acceptor molecule to form an alpha-(1->6) linkage.
GO Category: 
MF

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