3901 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
3901 chr_3 hypothetical protein 2079556 2081727 + hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7452094 Thaps3901.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0479

Most Highly Correlated Transcripts

268194

(Tp_Myb4R1b) SANT
0.8795

9353

(Tp_HSF_1c) HSF_DNA-bind superfamily
0.8738

6143

HSA
0.8699

4312

hypothetical protein
0.8684

24493

hypothetical protein
0.8648

8762

SNF2_N
0.864

262439

Bromodomain superfamily
0.8584

24592

hypothetical protein
0.8552

25653

hypothetical protein
0.8536

20681

hypothetical protein
0.8504

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 239415 282669 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 GO:0005634 GO:0006355 GO:0003755 GO:0004600 GO:0030051 GO:0042027 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

GO:0003755

peptidyl-prolyl cis-trans isomerase activity

Details: 
Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).
GO Category: 
MF

GO:0004600

NA

Details: 
NA
GO Category: 
NA

GO:0030051

NA

Details: 
NA
GO Category: 
NA

GO:0042027

NA

Details: 
NA
GO Category: 
NA

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