3919 Nop25
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
3919 chr_3 Nop25 2134775 2135620 + Nop25

Synonyms

NCBI ID Ensembl Genomes exon ID
7452101 Thaps3919.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0224

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0192
 0.36

Most Highly Correlated Transcripts

34357

Fcf2
0.9259

22099

hypothetical protein
0.9233

23737

tRNA_m1G_MT superfamily
0.9134

269559

hypothetical protein
0.911

21973

G-patch
0.9108

23210

hypothetical protein
0.9084

21979

DUF2373 superfamily
0.9082

bd1667

(bd1667) Mpp10
0.9072

bd1946

(bd1946) NA
0.9062

22498

DEXDc superfamily
0.9057

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Nop25 superfamily Nucleolar protein 12 (25kDa); Members of this family of proteins are part of the yeast nuclear pore... - 63.4783 7.06E-13 36 - 126 superfamily 255569
Nop25 superfamily Nucleolar protein 12 (25kDa); Members of this family of proteins are part of the yeast nuclear pore... - 63.4783 7.06E-13 36 - 126 superfamily 255569

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_37734 PHATRDRAFT_37734 272465 Not available Not available Not available Not available 348415

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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