39592 (NRT3) 2A0108
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
39592 chr_2 (NRT3) 2A0108 1483926 1486891 + 2A0108

Synonyms

NCBI ID Ensembl Genomes exon ID
7446659 Thaps39592.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0325

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0100
 0.39

Most Highly Correlated Transcripts

267979

HCO3_cotransp superfamily
0.9261

37609

PKc_like superfamily
0.92

13326

Choline_transpo
0.8906

1568

SRPBCC superfamily
0.8879

35136

NA
0.8853

260852

PRK04194
0.8847

35531

SET
0.8814

39062

SpoU
0.8751

9503

PTZ00121
0.8744

5856

Na_Ca_ex
0.8741

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MFS superfamily The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that... - 138.601 2.15E-35 513 - 911 superfamily 119392
MFS superfamily The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that... - 138.601 2.15E-35 513 - 911 superfamily 119392
2A0108 nitrite extrusion protein (nitrite facilitator); [Transport and binding proteins, Anions]. - 279.99 3.31E-85 509 - 877 multi-dom 233170

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Cre09.g410800.t1.2 AT1G12940.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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