40010 Mito_carr
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
40010 chr_3 Mito_carr 1647640 1648905 - Mito_carr

Synonyms

NCBI ID Ensembl Genomes exon ID
7449528 Thaps40010.2, Thaps40010.1, Thaps40010.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0225

Most Highly Correlated Transcripts

36007

Aldolase_II superfamily
0.9275

5053

hypothetical protein
0.9157

268443

SAICAR_synt_Sc
0.9083

39255

PLN02734
0.9076

38472

HA2
0.9066

42621

HisS
0.9026

21949

hypothetical protein
0.8996

37497

cysE
0.8969

270120

Uup
0.8951

4524

DHQS
0.8945

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 59.5703 1.58E-11 106 - 196 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 59.5703 1.58E-11 106 - 196 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 59.5703 1.58E-11 106 - 196 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 59.5703 1.58E-11 106 - 196 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 59.5703 1.58E-11 106 - 196 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 59.5703 1.58E-11 106 - 196 superfamily 249634

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_27326 PHATRDRAFT_27326 184588 312702 438645 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005488 GO:0006810 GO:0016020 -

GO:0005488

binding

Details: 
The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

Add comment

Log in to post comments