41256 PRK09280
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
41256 chr_7 PRK09280 246363 248763 - PRK09280
NCBI ID Ensembl Genomes exon ID
7446618 Thaps41256.3, Thaps41256.2, Thaps41256.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0180
Normalized Mean Residue
Thaps_bicluster_0045
0.44
(atpA) PRK09281
0.9342
Cytochrom_C1
0.905
EHD
0.9048
0.9003
PqqL
0.8996
(GPA2) G_alpha
0.8933
hypothetical protein
0.89
PqqL
0.8898
Cyt_c_Oxidase_VIb
0.8864
UAA
0.8845
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
F1-ATPase_beta F1 ATP synthase beta subunit, nucleotide-binding domain. The F-ATPase is found in bacterial plasma... cl17233 580.725 0 97 - 385 specific 238553
RecA-like_NTPases superfamily RecA-like NTPases. This family includes the NTP binding domain of F1 and V1 H+ATPases, DnaB and... - 580.725 0 97 - 385 superfamily 266574
ATP-synt_ab_C superfamily ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta chain, C terminal domain. - 117.373 1.11E-31 393 - 494 superfamily 249758
ATP-synt_ab_C superfamily ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta chain, C terminal domain. - 117.373 1.11E-31 393 - 494 superfamily 249758
ATP-synt_ab_N superfamily ATP synthase alpha/beta family, beta-barrel domain; This family includes the ATP synthase alpha and... - 79.4925 2.27E-18 29 - 95 superfamily 251583
ATP-synt_ab_N superfamily ATP synthase alpha/beta family, beta-barrel domain; This family includes the ATP synthase alpha and... - 79.4925 2.27E-18 29 - 95 superfamily 251583
PRK09280 F0F1 ATP synthase subunit beta; Validated - 966.133 0 24 - 499 multi-dom 236447
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available
KEGG description KEGG Pathway
Metabolic pathways map01100
GO:0005524 GO:0015986 GO:0016469 GO:0046933 GO:0046961 GO:0006754 GO:0000166 GO:0017111 GO:0008553 GO:0016021 GO:0045255 GO:0003936 -

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

ATP synthesis coupled proton transport

Details: 
The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis.
GO Category: 
BP

proton-transporting two-sector ATPase complex

Details: 
A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible.
GO Category: 
CC

proton-transporting ATP synthase activity, rotational mechanism

Details: 
Catalysis of the transfer of protons from one side of a membrane to the other according to the reaction: ADP + H2O + phosphate + H+(in) = ATP + H+(out), by a rotational mechanism.
GO Category: 
MF

proton-transporting ATPase activity, rotational mechanism

Details: 
Catalysis of the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism.
GO Category: 
MF

ATP biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
BP

nucleotide binding

Details: 
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO Category: 
MF

nucleoside-triphosphatase activity

Details: 
Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate.
GO Category: 
MF

hydrogen-exporting ATPase activity, phosphorylative mechanism

Details: 
Catalysis of the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) -> ADP + phosphate + H+(out). These transporters use a phosphorylative mechanism, which have a phosphorylated intermediate state during the ion transport cycle.
GO Category: 
MF

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

NA

Details: 
NA
GO Category: 
NA

NA

Details: 
NA
GO Category: 
NA
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