41314 ETF_betaThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
41314	chr_7	ETF_beta	771674	772991	-	ETF_beta

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444085	Thaps41314.2, Thaps41314.1, Thaps41314.3

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0101

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0289	0.38	5.7 330

Most Highly Correlated Transcripts

3071 NA 0.9257	20405 GRX_GRXh_1_2_like 0.9028	6757 hypothetical protein 0.8964	7617 hypothetical protein 0.8832	25302 hypothetical protein 0.8786	5584 P4Hc 0.8757
25349 hypothetical protein 0.8715	26769 ERG4_ERG24 superfamily 0.8713	36243 cyclophilin superfamily 0.8702	23170 hypothetical protein 0.8677

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ETF_beta		The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various...	cl00292	250.542	4.24E-83	2 - 219	specific	238847
AANH_like superfamily		Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases...	-	250.542	4.24E-83	2 - 219	superfamily	260331

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_17860	PHATRDRAFT_17860	267319	317512	202402	Cre12.g554953.t1.1	AT5G43430.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0005489 GO:0006118 -

Add comment

Log in to post comments