42326 PLN02830Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
42326	chr_14	PLN02830	223412	225944	+	PLN02830

Synonyms

NCBI ID	Ensembl Genomes exon ID
7451192	Thaps42326.4, Thaps42326.5, Thaps42326.3, Thaps42326.2, Thaps42326.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0017

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0204	0.18	4600 1400

Most Highly Correlated Transcripts

bd1306 (bd1306) NA 0.9809	bd1645 (bd1645) tpt 0.9754	270348 hypothetical protein 0.975	bd1820 (bd1820) Fasciclin 0.9715	bd1342 (bd1342) psaL 0.9633	bd1160 (bd1160) Chloroa_b-bind superfamily 0.9632
23918 hypothetical protein 0.962	bd218 (bd218) Chloroa_b-bind superfamily 0.9552	bd1403 (bd1403) NA 0.9547	35878 PLN02307 0.9522

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PLN02830		UDP-sugar pyrophosphorylase	cl11394	974.547	0	82 - 702	specific	215444
Glyco_tranf_GTA_type superfamily		Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a...	-	974.547	0	82 - 702	superfamily	264347

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_23639	PHATRDRAFT_23639	242958	318586	454930	Not available	Not available	312734

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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