42545 PA superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
42545 chr_15 PA superfamily 761010 763506 + PA superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7450297 Thaps42545.2, Thaps42545.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0482

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0082
 0.46

Most Highly Correlated Transcripts

20703

hypothetical protein
0.8858

bd739

(bd739) NA
0.8729

bd1802

(bd1802) NA
0.8699

25294

hypothetical protein
0.8478

24486

hypothetical protein
0.8399

21613

hypothetical protein
0.8318

21213

hypothetical protein
0.8279

bd945

(bd945) COG3899
0.8257

bd954

(bd954) NA
0.8257

11609

hypothetical protein
0.8208

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PA superfamily PA: Protease-associated (PA) domain. The PA domain is an insert domain in a diverse fraction of... - 87.5368 1.57E-20 49 - 192 superfamily 263543

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
262046 Not available Not available Not available Not available Cre02.g095111.t1.1 AT1G30900.1 506174

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006508 GO:0008233 -

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008233

peptidase activity

Details: 
Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
GO Category: 
MF

Add comment

Log in to post comments