6032 Ubox
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
6032 chr_6 Ubox 529589 530595 - Ubox
NCBI ID Ensembl Genomes exon ID
7451177 Thaps6032.3, Thaps6032.2, Thaps6032.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0137
Normalized Mean Residue
Thaps_bicluster_0036
0.41
PKc_like superfamily
0.8864
hypothetical protein
0.8856
NA
0.8731
hypothetical protein
0.8724
(Tp_CCCH26) regulator [Rayko]
0.8688
hypothetical protein
0.8682
COG0398
0.8679
(H4_2) H4
0.8672
GRX_GRXh_1_2_like
0.8667
PRA1 superfamily
0.8621
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ubox Modified RING finger domain; Modified RING finger domain, without the full complement of Zn2+-... cl17544 71.8825 1.28E-16 26 - 87 specific 128780
U-box superfamily U-box domain; This domain is related to the Ring finger pfam00097 but lacks the zinc binding... - 71.8825 1.28E-16 26 - 87 superfamily 266741
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0000151 GO:0004842 GO:0016567 -

ubiquitin ligase complex

Details: 
A protein complex that includes a ubiquitin-protein ligase and other proteins that may confer substrate specificity on the complex.
GO Category: 
CC

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF

protein ubiquitination

Details: 
The process in which one or more ubiquitin groups are added to a protein.
GO Category: 
BP
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