6233 DUF4239Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
6233	chr_6	DUF4239	1063203	1064681	-	DUF4239

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445971	Thaps6233.1, Thaps6233.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0135

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0255	0.31	150 10000

Most Highly Correlated Transcripts

1985 hypothetical protein 0.9257	9265 hypothetical protein 0.9132	269276 hypothetical RNA binding protein 0.9125	24174 DUF1336 superfamily 0.9068	19435 PTZ00184 0.8983	21843 hypothetical protein 0.8957
20753 PDI_a_family 0.8955	7029 SET 0.8938	23586 hypothetical protein 0.8905	21025 hypothetical protein 0.8896

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF4239 superfamily		Protein of unknown function (DUF4239); This family of proteins is functionally uncharacterized....	-	233.809	6.65E-74	31 - 246	superfamily	258258
DUF4239 superfamily		Protein of unknown function (DUF4239); This family of proteins is functionally uncharacterized....	-	233.809	6.65E-74	31 - 246	superfamily	258258

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	232727	317516	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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