6258 Nudix_Hydrolase superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
6258 chr_6 Nudix_Hydrolase superfamily 1130040 1130820 - Nudix_Hydrolase superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7445984 Thaps6258.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0285

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0039
 0.52

Most Highly Correlated Transcripts

bd1822

(bd1822) SCP superfamily
0.8332

bd739

(bd739) NA
0.8153

bd740

(bd740) NA
0.8114

4372

hypothetical protein
0.8099

bd1802

(bd1802) NA
0.8082

270255

(NTT7) hypothetical protein
0.8059

34197

Ntn_hydrolase superfamily
0.8005

bd1891

(bd1891) COG3899
0.7967

bd1749

(bd1749) NA
0.7902

bd1803

(bd1803) NA
0.7888

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Nudix_Hydrolase superfamily Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes... - 108.928 2.88E-29 89 - 222 superfamily 260427

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
24590 Not available Not available Not available 116755 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004452 GO:0008299 -

GO:0004452

isopentenyl-diphosphate delta-isomerase activity

Details: 
Catalysis of the reaction: isopentenyl diphosphate = dimethylallyl diphosphate.
GO Category: 
MF

GO:0008299

isoprenoid biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues.
GO Category: 
BP

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