8536 CDC6
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
8536 chr_10 CDC6 834773 841062 - CDC6

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0082

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0292
 0.20

Most Highly Correlated Transcripts

bd439

(bd439) POLBc_alpha
0.9904

bd1983

(bd1983) RecA-like_NTPases superfamily
0.9744

4688

hypothetical protein
0.9575

1622

AE_Prim_S
0.9462

36441

CYCLIN
0.943

32661

ABC_ATPase superfamily
0.9419

5431

hypothetical protein
0.9373

5867

CDC6
0.9356

4041

HEC1
0.9342

35968

RecA-like_NTPases superfamily
0.9339

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair /... - 83.554 5.09E-17 1586 - 1856 multi-dom 224391

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_42584 PHATRDRAFT_42584 249773 287881 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000166 GO:0017111 GO:0004308 -

GO:0000166

nucleotide binding

Details: 
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO Category: 
MF

GO:0017111

nucleoside-triphosphatase activity

Details: 
Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate.
GO Category: 
MF

GO:0004308

exo-alpha-sialidase activity

Details: 
Catalysis of the hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)-glycosidic linkages of terminal sialic residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates.
GO Category: 
MF

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