8901 dTDP_HR_like_SDR_e
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
8901 chr_11b dTDP_HR_like_SDR_e 24779 25915 + dTDP_HR_like_SDR_e

Synonyms

NCBI ID Ensembl Genomes exon ID
7445444 Thaps8901.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0173

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0089
 0.36

Most Highly Correlated Transcripts

8880

hypothetical protein
0.8213

263836

Ggt
0.8032

1899

hypothetical protein
0.7627

1936

hypothetical protein
0.745

11503

hypothetical protein
0.7275

8737

hypothetical protein
0.7201

8954

hypothetical protein
0.7197

8872

hypothetical protein
0.717

7478

SseA
0.7166

264285

crotonase-like
0.7151

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
dTDP_HR_like_SDR_e dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs; dTDP-6-deoxy-L-... cl09931 211.716 1.77E-65 12 - 343 specific 187564
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 211.716 1.77E-65 12 - 343 superfamily 263925
RmlD_sub_bind RmlD substrate binding domain; L-rhamnose is a saccharide required for the virulence of some... - 162.012 1.38E-46 12 - 343 multi-dom 252525

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0004478 GO:0048269 GO:0048270 -

GO:0004478

methionine adenosyltransferase activity

Details: 
Catalysis of the reaction: ATP + L-methionine + H2O = phosphate + diphosphate + S-adenosyl-L-methionine.
GO Category: 
MF

GO:0048269

methionine adenosyltransferase complex

Details: 
A multimeric enzyme complex composed of variable numbers of catalytic alpha subunits, and noncatalytic beta subunits. The beta subunits are believed to have a regulatory function. The enzyme complex catalyzes the synthesis of S-adenosylmethionine (AdoMet), which is the major methyl group donor, participating in the methylation of proteins, DNA, RNA, phospholipids, and other small molecules.
GO Category: 
CC

GO:0048270

methionine adenosyltransferase regulator activity

Details: 
Modulates the activity of methionine adenosyltransferase.
GO Category: 
MF

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