932 Choline_transpo superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
932 chr_1 Choline_transpo superfamily 193847 196587 - Choline_transpo superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7445251 Thaps932.2, Thaps932.1, Thaps932.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0378

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0031
 0.36

Most Highly Correlated Transcripts

13556

BglC
0.8449

bd622

(bd622) NA
0.8407

268965

(acnB) PLN00094
0.8251

270138

(GLNN) GSIII_N superfamily
0.8176

20670

hypothetical protein
0.8018

262719

CHD
0.7978

11411

(CSN1) CS_ACL-C_CCL superfamily
0.7934

2418

hypothetical protein
0.7915

25315

hypothetical protein
0.7836

38555

Motor_domain superfamily
0.7832

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Choline_transpo superfamily Plasma-membrane choline transporter; This family represents a high-affinity plasma-membrane choline... - 144.666 7.23E-38 506 - 786 superfamily 252644

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_36842 PHATR_36842 207649 244249 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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