bd1013 (bd1013) PRX_Typ2cysThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
bd1013	bd_26x41	(bd1013) PRX_Typ2cys	43973	44727	-	PRX_Typ2cys

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0063

Most Highly Correlated Transcripts

ThpsCp024 (rpl35) ribosomal protein L35 0.9971	ThpsCp023 (ycf42) putative peroxiredoxin ycf42 0.9793	ThpsCp025 (rpl20) ribosomal protein L20 0.9718	ThpsCp081 (secA) preprotein translocase subunit SecA 0.9656	ThpsCp135 (secA) preprotein translocase subunit SecA 0.9656	bd1243 (bd1243) rpl33 0.9573
ThpsCp036 (rpl33) ribosomal protein L33 0.9573	ThpsCp079 (rpl21) ribosomal protein L21 0.9392	ThpsCp137 (rpl21) ribosomal protein L21 0.9392	bd573 (bd573) petA 0.9327

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PRX_Typ2cys		Peroxiredoxin (PRX) family, Typical 2-Cys PRX subfamily; PRXs are thiol-specific antioxidant (TSA)...	cl00388	239.714	3.30E-80	7 - 178	specific	239313
Thioredoxin_like superfamily		Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; The thioredoxin (TRX...	-	239.714	3.30E-80	7 - 178	superfamily	260398
AhpC		Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]	-	190.14	1.41E-60	5 - 178	multi-dom	223527

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Cre06.g257601.t1.2	AT3G11630.1	283992

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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