PHATRDRAFT_41002 thif family (YgdL_like)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_41002	chr_27	thif family (YgdL_like)	107494	108921	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0201

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0226	0.15	45 9200

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
YgdL_like		Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical...	cl17196	239.044	1.62E-75	69 - 321	specific	238384
E1_enzyme_family superfamily		Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes...	-	239.044	1.62E-75	69 - 321	superfamily	266547
COG1179		Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [...	-	221.788	1.48E-68	55 - 332	multi-dom	224100

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
262699		Not available	225801	194318	102870	Cre03.g159400.t1.2	AT5G37530.2	468262

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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