1095 protease_HslV
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
1095 chr_1 protease_HslV 651764 652627 + protease_HslV

Synonyms

NCBI ID Ensembl Genomes exon ID
7453434 Thaps1095.1, Thaps1095.3, Thaps1095.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0430

Most Highly Correlated Transcripts

37118

FeThRed_B
0.9156

37497

cysE
0.9106

41655

Chloroa_b-bind
0.91

31598

cyclophilin superfamily
0.9026

23819

hypothetical protein
0.9007

8138

hypothetical protein
0.9001

40978

PRP11
0.8949

3348

hypothetical protein
0.8948

7547

hypothetical protein
0.892

261607

IF4E
0.8902

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
protease_HslV Protease HslV and the ATPase/chaperone HslU are part of an ATP-dependent proteolytic system that is... cl00467 269.447 4.17E-92 34 - 192 specific 238894
Ntn_hydrolase superfamily The Ntn hydrolases (N-terminal nucleophile) are a diverse superfamily of of enzymes that are... - 269.447 4.17E-92 34 - 192 superfamily 260443

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_21135 PHATR_21135 198742 242358 47629 Cre14.g628350.t1.2 Not available 477622

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004298 GO:0005839 GO:0006511 -

GO:0004298

threonine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile.
GO Category: 
MF

GO:0005839

proteasome core complex

Details: 
A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex.
GO Category: 
CC

GO:0006511

ubiquitin-dependent protein catabolic process

Details: 
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
GO Category: 
BP

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