1586 UreD superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
1586 chr_1 UreD superfamily 1898653 1901610 - UreD superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443141 Thaps1586.2, Thaps1586.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0345

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0022
 0.44

Most Highly Correlated Transcripts

22918

hypothetical protein
0.7749

21943

Gar1 superfamily
0.7667

2047

hypothetical protein
0.7658

1701

hypothetical protein
0.763

5557

DUS_like_FMN
0.7571

262616

(MYB22)
0.7564

3502

hypothetical protein
0.7535

12960

Vac14_Fig4_bd
0.7515

263650

NAD_binding_8 superfamily
0.7497

2327

SMC_prok_B
0.749

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
UreD superfamily UreD urease accessory protein; UreD is a urease accessory protein. Urease pfam00449 hydrolyses urea... - 103.363 1.07E-24 186 - 414 superfamily 260481
UreF superfamily UreF; This family consists of the Urease accessory protein UreF. The urease enzyme (urea... - 81.976 2.70E-17 572 - 792 superfamily 268170

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48625 PHATRDRAFT_48625 268087 243105 Not available Not available AT1G21840.1 533886

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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