26492 PRK05385
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
26492 chr_1 PRK05385 130078 133093 + PRK05385
NCBI ID Ensembl Genomes exon ID
Not available Thaps26492.2, Thaps26492.3, Thaps26492.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0231
Normalized Mean Residue
Thaps_bicluster_0069
0.35
hypothetical protein
0.9986
SrmB
0.9176
(RPA1) RNAP_I_RPA1_N
0.9146
(TKT1) PLN02790
0.9145
(TopoII_1) gyrB
0.9121
SIK1
0.9105
hypothetical protein
0.9046
PLN02502
0.9008
YgdL_like
0.9006
SRP40_C superfamily
0.9003
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PurM PurM (Aminoimidazole Ribonucleotide [AIR] synthetase), one of eleven enzymes required for purine... cl10019 451.544 1.15E-151 597 - 888 specific 100032
PurM-like superfamily AIR (aminoimidazole ribonucleotide) synthase related protein. This family includes Hydrogen... - 451.544 1.15E-151 597 - 888 superfamily 263946
GARS_A Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase... cl17255 297.631 2.33E-94 39 - 232 specific 250341
ATP-grasp_4 superfamily ATP-grasp domain; This family includes a diverse set of enzymes that possess ATP-dependent... - 297.631 2.33E-94 39 - 232 superfamily 266590
FMT_core superfamily Formyltransferase, catalytic core domain; Formyltransferase, catalytic core domain. The proteins of... - 192.217 2.48E-56 373 - 558 superfamily 260403
GARS_C superfamily Phosphoribosylglycinamide synthetase, C domain; Phosphoribosylglycinamide synthetase catalyses the... - 109.939 4.27E-28 267 - 368 superfamily 251568
GARS_C superfamily Phosphoribosylglycinamide synthetase, C domain; Phosphoribosylglycinamide synthetase catalyses the... - 109.939 4.27E-28 267 - 368 superfamily 251568
PRK05385 phosphoribosylaminoimidazole synthetase; Provisional - 511.945 1.26E-174 564 - 888 multi-dom 235439
PRK13790 phosphoribosylamine--glycine ligase; Provisional - 271.29 5.30E-82 2 - 371 multi-dom 237507
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_47067 PHATRDRAFT_47067 209097 256401 455883 Cre07.g318750.t1.2 AT3G55010.2 285180
KEGG description KEGG Pathway
Not available Not available
GO:0004637 GO:0009113 GO:0003824 GO:0009058 GO:0016742 GO:0004644 GO:0006189 GO:0004641 GO:0005737 -

phosphoribosylamine-glycine ligase activity

Details: 
Catalysis of the reaction: 5-phospho-D-ribosylamine + ATP + glycine = N(1)-(5-phospho-D-ribosyl)glycinamide + ADP + 2 H(+) + phosphate.
GO Category: 
MF

purine nucleobase biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of purine nucleobases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, which include adenine and guanine.
GO Category: 
BP

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO Category: 
BP

hydroxymethyl-, formyl- and related transferase activity

Details: 
Catalysis of the transfer of a hydroxymethyl- or formyl group from one compound (donor) to another (acceptor).
GO Category: 
MF

phosphoribosylglycinamide formyltransferase activity

Details: 
Catalysis of the reaction: 10-formyltetrahydrofolate + N1-(5-phospho-D-ribosyl)glycinamide = tetrahydrofolate + N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide.
GO Category: 
MF

'de novo' IMP biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of IMP, inosine monophosphate, by the stepwise assembly of a purine ring on ribose 5-phosphate.
GO Category: 
BP

phosphoribosylformylglycinamidine cyclo-ligase activity

Details: 
Catalysis of the reaction: 2-(formamido)-N(1)-(5-phospho-D-ribosyl)acetamidine + ATP = 5-amino-1-(5-phospho-D-ribosyl)imidazole + ADP + 2 H(+) + phosphate.
GO Category: 
MF

cytoplasm

Details: 
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO Category: 
CC
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