Phatr_hclust_0027 Hierarchical Clustering
Phaeodactylum tricornutum

Cluster Plot Conditions Plot Dendrogram
GO ID Go Term p-value q-value Cluster
GO:0006355 regulation of transcription, DNA-dependent 0.0000235 0.0742442 Phatr_hclust_0027
GO:0006120 mitochondrial electron transport, NADH to ubiquinone 0.0132807 1 Phatr_hclust_0027
GO:0006811 ion transport 0.0478862 1 Phatr_hclust_0027
GO:0006397 mRNA processing 0.0976524 1 Phatr_hclust_0027
GO:0006812 cation transport 0.113688 1 Phatr_hclust_0027
GO:0006310 DNA recombination 0.152607 1 Phatr_hclust_0027
GO:0006396 RNA processing 0.222148 1 Phatr_hclust_0027
GO:0016567 protein ubiquitination 0.276493 1 Phatr_hclust_0027
GO:0006412 protein biosynthesis 0.519015 1 Phatr_hclust_0027
GO:0006468 protein amino acid phosphorylation 0.542981 1 Phatr_hclust_0027
PHATRDRAFT_24886 : transcription factor protein (HMGB-UBF_HMG-box)
PHATRDRAFT_13944 : ribonuclease iii (RIBOc superfamily)
PHATRDRAFT_39864 : rna binding s1 domain protein (HHH_3)
PHATRDRAFT_45546 : leucine rich repeat familyexpressed
PHATRDRAFT_48683 : ankyrin unc44 (ANK)
PHATRDRAFT_45409 : sr protein related family member (rsr-1) (BRLZ)
PHATRDRAFT_44038 : double-stranded rna-specific editase (A_deamin superfamily)
PHATRDRAFT_43828 : ion transport protein (Ion_trans)
PHATRDRAFT_48573 : telomeric repeat binding factorisoform cra_a (SANT_TRF)
PHATRDRAFT_37406 : heat shock 105kda 110kda proteinisoform cra_a
PHATRDRAFT_45840 : c-type u1 snrnp
PHATRDRAFT_48046 : tkl family protein kinase (PKc)
PHATRDRAFT_38338 : heat shock protein hsp70 family protein
PHATRDRAFT_42995 : enhancer of polycomb-like protein (EPL1 superfamily)
PHATRDRAFT_54789 : homo sapiensadapter-related protein complex 3 beta 2 subunit (beta-adaptin 3b) (ap-3 complex beta-3b subunit) (beta-3b-adaptin) (neuron-specific vesicle coat protein beta-nap) (Adaptin_N)
PHATRDRAFT_31898 : heat shock 105kda 110kda proteinisoform cra_a
PHATRDRAFT_24006 : mitochondrial intermediate peptidase (GluZincin superfamily)
PHATRDRAFT_43944 : nadh dehydrogenase (PLN03132)
PHATRDRAFT_34252 : heat shock protein hsp70 family protein
PHATRDRAFT_49557 : heat shock protein (HSF_DNA-bind)
PHATRDRAFT_39786 : hsf protein (HSF_DNA-bind)
PHATRDRAFT_43413 : heat shock transcription factor hsf (HSF_DNA-bind superfamily)
PHATRDRAFT_49566 : heat shock transcription factor hsf1 (HSF_DNA-bind)
PHATRDRAFT_20588 : (Sm_like superfamily)
PHATRDRAFT_43821 : rad18_schpo postreplication repair e3 ubiquitin-protein ligase rad18 (rad18 homolog) (rad18)
PHATRDRAFT_47885 : nadh dehydrogenase (zf-CHCC)
PHATRDRAFT_48570 : rhodanese domain protein (RHOD)
Condition Condition Difference FDR
Re-illuminated_6h Re-illuminated_6h -1.664 0.000505051
Copper_SH Copper_SH -0.084 0.233477
Green_vs_Red_24h Green_vs_Red_24h 0.444 0.00178571
Silver_SH Silver_SH 0.004 0.966393
Cadmium_1.2mg Cadmium_1.2mg 0.044 0.395781
BlueLight_24h BlueLight_24h -0.723 0.00128205
GreenLight_0.5h GreenLight_0.5h -1.841 0.000458716
RedLight_6h RedLight_6h -1.805 0.000694444
light_16hr_dark_7.5hr light_16hr_dark_7.5hr -0.000 1
GreenLight_24h GreenLight_24h -0.780 0.000961538
light_6hr light_6hr 0.207 0.150184
dark_8hr_light_3hr dark_8hr_light_3hr 0.247 0.0431953
Blue_vs_Green_6h Blue_vs_Green_6h 0.161 0.00462963
Ammonia_SH Ammonia_SH 0.116 0.532751
Simazine_SH Simazine_SH -0.225 0.00617647
Oil_SH Oil_SH -0.207 0.00384615
Salinity_15ppt_SH Salinity_15ppt_SH 0.094 0.227367
Cadmium_SH Cadmium_SH -0.196 0.0126543
Blue_vs_Red_24h Blue_vs_Red_24h 0.501 0.00166667
highlight_0to6h highlight_0to6h 0.100 0.457544
BlueLight_0.5h BlueLight_0.5h -1.468 0.000462963
Dispersant_SH Dispersant_SH -0.035 0.661002
light_16hr_dark_4hr light_16hr_dark_4hr -0.045 0.596247
light_15.5hr light_15.5hr -0.121 0.466923
light_10.5hr light_10.5hr 0.091 0.638451
Dispersed_oil_SH Dispersed_oil_SH -0.170 0.0285714
Si_free Si_free 0.001 0.988477
Re-illuminated_0.5h Re-illuminated_0.5h -1.432 0.000396825
Mixture_SH Mixture_SH 0.029 0.907531
Blue_vs_Red_6h Blue_vs_Red_6h 0.107 0.465046
light_16hr_dark_30min light_16hr_dark_30min -0.110 0.517468
BlueLight_6h BlueLight_6h -1.698 0.000581395
highlight_12to48h highlight_12to48h 0.177 0.188353
RedLight_24h RedLight_24h -1.223 0.000943396
Dark_treated Dark_treated -0.380 0.35264
GreenLight_6h GreenLight_6h -1.859 0.000609756
Cadmium_0.12mg Cadmium_0.12mg 0.030 0.252761
Blue_vs_Green_24h Blue_vs_Green_24h 0.057 0.256173
RedLight_0.5h RedLight_0.5h -2.090 0.000555556
Green_vs_Red_6h Green_vs_Red_6h -0.054 0.762423
Re-illuminated_24h Re-illuminated_24h -1.108 0.000657895
MEME Output