Organism : Halobacterium salinarum NRC-1 | Module List :
Regulation information for VNG2661G(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 2 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Functional Enrichment for VNG2661G
Module neighborhood information for VNG2661G
|Gene||Common Name||Description||Module membership|
|VNG2657G||rps7p||30S ribosomal protein S7P||98, 137|
|VNG2658G||rps12P||30S ribosomal protein S12P||23, 39, 40, 45, 98, 110, 137|
|VNG2661G||nusA||transcription elongation factor NusA-like protein||98|
|VNG2662G||rpoC||DNA-directed RNA polymerase subunit A''||45, 98|
|VNG2664Gm||rpoA1||DNA-directed RNA polymerase subunit A'||40, 98, 110|
|VNG2665G||rpoB'||DNA-directed RNA polymerase subunit B'||40, 98, 110, 197|
|VNG2666G||rpoB''||DNA-directed RNA polymerase subunit beta''||2, 16, 40, 98, 110|
|VNG2668G||rpoH||DNA-directed RNA polymerase subunit H||40, 98, 110, 197|
|VNG6199G||cdc48d||cell division cycle protein||98, 125, 240|
|VNG6201G||hsp5||heat shock protease protein||3, 49, 71, 79, 98, 100, 113, 187, 240|
|VNG7024||gvpD||gas vesicle protein GvpD||98|
|VNG7026||gvpC||gas vesicle protein GvpC||98|
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CircVisOur circular module explorer is adapted from visquick originally developed by Dick Kreisberg of Ilya Shmulevich lab at ISB for The Cancer Genome Atlas. We use simplified version of visquick to display distribution of module members and their interactions across the genome. This view provides summary of regulation information for a gene. The main components are;
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